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raxml-ng

Here are 5 public repositories matching this topic...

snpick

PathoGenOmics-Lab / snpick

snpick is a fast and memory-efficient Rust-based SNP extraction tool designed to handle large genomic alignments with minimal RAM usage and high-speed performance.

rust fast snps alignments fasta raxml phylogeny asc iqtree raxml-ng iqtree2 snp-sites snpick

Updated Nov 20, 2024
Rust

Rendrick27 / PhyloFlow

This pipeline automates the process of generating phylogenetic trees from sequence data, specifically designed for high-throughput and efficient analysis.

python bioinformatics-pipeline mafft philogenetic-trees raxml-ng modeltest-ng toytree

Updated May 19, 2024
Python

lukashuebner / ft-raxml-ng

RAxML-ng is able to handle hardware failures when run with a failure mitigating MPI implementation (e.g. ULFM).

ulfm raxml-ng

Updated Feb 29, 2024
C++

ayoraind / SKA_phylogeny

A Nextflow pipeline to generate a phylogenetic tree from SKA alignment

workflow nextflow alignment ska phylogeny fastme phylogenetic-tree nextflow-pipeline reference-free fasttree iqtree raxml-ng split-kmer rapidnj

Updated Dec 19, 2024
Nextflow

Rohit-Rannavre / Phylogenetic-Trees

This repository contains some phylogenetic trees I have done for practical purposes.

bioinformatics evolution phylogenetics tracer molecular-biology phylogeny mrbayes beast2 evolutionary-biology iqtree raxml-ng partitionfinder2 densitree

Updated Apr 22, 2025

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