Mesa implementation of Ising Model

.github/workflows/test_examples.yml

@@ -0,0 +1,60 @@
+name: Test example models
+
+on:
+  push:
+    paths:
+      - 'examples/**/*.py'  # If an example model is modified
+      - 'test_examples.py'  # If the test script is modified
+      - '.github/workflows/test_examples.yml'  # If this workflow is modified
+  pull_request:
+    paths:
+      - 'examples/**/*.py'
+      - 'test_examples.py'
+      - '.github/workflows/test_examples.yml'
+  workflow_dispatch:
+  schedule:
+    - cron: '0 6 * * 1'  # Monday at 6:00 UTC
+
+jobs:
+  # build-stable:
+  #   runs-on: ubuntu-latest
+  #   steps:
+  #   - uses: actions/checkout@v4
+  #   - name: Set up Python
+  #     uses: actions/setup-python@v5
+  #     with:
+  #       python-version: "3.12"
+  #   - name: Install dependencies
+  #     run: pip install mesa pytest
+  #   - name: Test with pytest
+  #     run: pytest -rA -Werror test_examples.py
+
+  build-pre:
+    runs-on: ubuntu-latest
+    steps:
+    - uses: actions/checkout@v4
+    - name: Set up Python
+      uses: actions/setup-python@v5
+      with:
+        python-version: "3.12"
+    - name: Install dependencies
+      run: |
+        pip install mesa --pre
+        pip install .[test]
+    - name: Test with pytest
+      run: pytest -rA -Werror -Wdefault::FutureWarning test_examples.py
+
+  build-main:
+    runs-on: ubuntu-latest
+    steps:
+    - uses: actions/checkout@v4
+    - name: Set up Python
+      uses: actions/setup-python@v5
+      with:
+        python-version: "3.12"
+    - name: Install dependencies
+      run: |
+        pip install .[test]
+        pip install -U git+https://github.com/projectmesa/mesa@main#egg=mesa
+    - name: Test with pytest
+      run: pytest -rA -Werror -Wdefault::FutureWarning test_examples.py

.github/workflows/test_gis_examples.yml

@@ -0,0 +1,60 @@
+name: Test GIS models
+
+on:
+  push:
+    paths:
+      - 'gis/**/*.py'  # If a gis model is modified
+      - 'test_gis_examples.py'  # If the gis test script is modified
+      - '.github/workflows/test_gis_examples.yml'  # If this workflow is modified
+  pull_request:
+    paths:
+      - 'gis/**/*.py'
+      - 'test_gis_examples.py'
+      - '.github/workflows/test_gis_examples.yml'
+  workflow_dispatch:
+  schedule:
+    - cron: '0 6 * * 1'  # Monday at 6:00 UTC
+
+jobs:
+  # build-stable:
+  #   runs-on: ubuntu-latest
+  #   steps:
+  #   - uses: actions/checkout@v4
+  #   - name: Set up Python
+  #     uses: actions/setup-python@v5
+  #     with:
+  #       python-version: "3.12"
+  #   - name: Install dependencies
+  #     run: pip install mesa pytest
+  #   - name: Test with pytest
+  #     run: pytest -rA -Werror test_examples.py
+
+  build-pre:
+    runs-on: ubuntu-latest
+    steps:
+    - uses: actions/checkout@v4
+    - name: Set up Python
+      uses: actions/setup-python@v5
+      with:
+        python-version: "3.12"
+    - name: Install dependencies
+      run: |
+        pip install mesa-geo --pre
+        pip install .[test_gis]
+    - name: Test with pytest
+      run: pytest -rA -Werror test_gis_examples.py
+
+  build-main:
+    runs-on: ubuntu-latest
+    steps:
+    - uses: actions/checkout@v4
+    - name: Set up Python
+      uses: actions/setup-python@v5
+      with:
+        python-version: "3.12"
+    - name: Install dependencies
+      run: |
+        pip install -U git+https://github.com/projectmesa/mesa-geo@main#egg=mesa-geo
+        pip install .[test_gis]
+    - name: Test with pytest
+      run: pytest -rA -Werror test_gis_examples.py

.pre-commit-config.yaml

@@ -4,7 +4,7 @@ ci:
 repos:
 - repo: https://github.com/astral-sh/ruff-pre-commit
   # Ruff version.
-  rev: v0.5.0
+  rev: v0.6.3
   hooks:
     # Run the linter.
     # TODO fix the lint issues for the Jupyter notebooks
@@ -14,7 +14,7 @@ repos:
     - id: ruff-format
       types_or: [ python, pyi, jupyter ]
 -   repo: https://github.com/asottile/pyupgrade
-    rev: v3.16.0
+    rev: v3.17.0
     hooks:
     -   id: pyupgrade
         args: [--py38-plus]

README.md

@@ -1,6 +1,9 @@
-# mesa-examples
+# Mesa Examples
 
-This repository contains examples that work with Mesa and illustrate different features of Mesa.
+This repository contains examples that work with Mesa and illustrate different features of Mesa. For more information on each model, see its own Readme and documentation.
+
+- Mesa examples that work on the Mesa and Mesa-Geo main development branches are available here on the [`main`](https://github.com/projectmesa/mesa-examples) branch.
+- Mesa examples that work with Mesa 2.x releases and Mesa-Geo 0.8.x releases are available here on the [`mesa-2.x`](https://github.com/projectmesa/mesa-examples/tree/mesa-2.x) branch.
 
 To contribute to this repository, see [CONTRIBUTING.rst](https://github.com/projectmesa/mesa-examples/blob/main/CONTRIBUTING.rst).
 
@@ -9,7 +12,148 @@ This repo also contains a package that readily lets you import and run some of t
 $ # This will install the "mesa_models" package
 $ pip install -U -e git+https://github.com/projectmesa/mesa-examples#egg=mesa-models
 ```
+For Mesa 2.x examples, install:
+```console
+$ # This will install the "mesa_models" package
+$ pip install -U -e git+https://github.com/projectmesa/mesa-examples@mesa-2.x#egg=mesa-models
+```
 ```python
 from mesa_models.boltzmann_wealth_model.model import BoltzmannWealthModel
+
 ```
 You can see the available models at [setup.cfg](https://github.com/projectmesa/mesa-examples/blob/main/setup.cfg).
+
+Table of Contents
+=================
+
+* [Grid Spacce Examples](#grid-space-examples)
+* [Continuous Space Examples](#continuous-space-examples)
+* [Network Examples](#network-examples)
+* [Visualization Examples](#visualization-examples)
+* [GIS Examples](#gis-examples)
+* [Other Examples](#other-examples)
+
+## Grid Space Examples
+
+### [Bank Reserves Model](https://github.com/projectmesa/mesa-examples/blob/main/examples/bank_reserves)
+
+A highly abstracted, simplified model of an economy, with only one type of agent and a single bank representing all banks in an economy.
+
+### [Boltzmann Wealth Model](https://github.com/projectmesa/mesa-examples/tree/main/examples/boltzmann_wealth_model)
+
+Completed code to go along with the [tutorial](https://mesa.readthedocs.io/en/latest/tutorials/intro_tutorial.html) on making a simple model of how a highly-skewed wealth distribution can emerge from simple rules.
+
+### [Color Patches Model](https://github.com/projectmesa/mesa-examples/tree/main/examples/color_patches)
+
+A cellular automaton model where agents opinions are influenced by that of their neighbors. As the model evolves, color patches representing the prevailing opinion in a given area expand, contract, and sometimes disappear.
+
+### [Conway's Game Of "Life" Model](https://github.com/projectmesa/mesa-examples/tree/main/examples/conways_game_of_life)
+
+Implementation of [Conway's Game of Life](https://en.wikipedia.org/wiki/Conway%27s_Game_of_Life), a cellular automata where simple rules can give rise to complex patterns.
+
+### [Conway's Game Of "Life" Model (Fast)](https://github.com/projectmesa/mesa-examples/tree/main/examples/conways_game_of_life_fast)
+
+A very fast performance optimized version of Conway's Game of Life using the Mesa [`PropertyLayer`](https://github.com/projectmesa/mesa/pull/1898). About 100x as fast as the regular versions, but limited visualisation (for [now](https://github.com/projectmesa/mesa/issues/2138)).
+
+### [Conway's Game Of "Life" Model on a Hexagonal Grid](https://github.com/projectmesa/mesa-examples/tree/main/examples/hex_snowflake)
+
+Conway's game of life on a hexagonal grid.
+
+### [Demographic Prisoner's Dilemma on a Grid](https://github.com/projectmesa/mesa-examples/tree/main/examples/pd_grid)
+
+Grid-based demographic prisoner's dilemma model, demonstrating how simple rules can lead to the emergence of widespread cooperation -- and how a model activation regime can change its outcome.
+
+### [Epstein Civil Violence Model](https://github.com/projectmesa/mesa-examples/tree/main/examples/epstein_civil_violence)
+
+Joshua Epstein's [model](http://www.uvm.edu/~pdodds/files/papers/others/2002/epstein2002a.pdf) of how a decentralized uprising can be suppressed or reach a critical mass of support.
+
+### [Forest Fire Model](https://github.com/projectmesa/mesa-examples/tree/main/examples/forest_fire)
+
+Simple cellular automata of a fire spreading through a forest of cells on a grid, based on the NetLogo [Fire](http://ccl.northwestern.edu/netlogo/models/Fire) model.
+
+### [Hotelling's Law Model](https://github.com/projectmesa/mesa-examples/tree/main/examples/hotelling_law)
+
+This project is an agent-based model implemented using the Mesa framework in Python. It simulates market dynamics based on Hotelling's Law, exploring the behavior of stores in a competitive market environment. Stores adjust their prices and locations if it's increases market share to maximize revenue, providing insights into the effects of competition and customer behavior on market outcomes.
+
+### [Schelling Segregation Model](https://github.com/projectmesa/mesa-examples/tree/main/examples/schelling)
+
+Mesa implementation of the classic [Schelling segregation](http://nifty.stanford.edu/2014/mccown-schelling-model-segregation/) model.
+
+### [Sugarscape Constant Growback Model](https://github.com/projectmesa/mesa-examples/tree/main/examples/sugarscape_cg)
+
+This is Epstein & Axtell's Sugarscape Constant Growback model, with a detailed description in the Chapter Two of *Growing Artificial Societies: Social Science from the Bottom Up*. It is based on the Netlogo
+[Sugarscape 2 Constant Growback](http://ccl.northwestern.edu/netlogo/models/Sugarscape2ConstantGrowback) model.
+
+### [Sugarscape Constant Growback Model with Traders](https://github.com/projectmesa/mesa-examples/tree/main/examples/sugarscape_g1mt)
+
+This is Epstein & Axtell's Sugarscape model with Traders, a detailed description is in Chapter four of *Growing Artificial Societies: Social Science from the Bottom Up (1996)*. The model shows an emergent price equilibrium can happen via a decentralized dynamics.
+
+### [Wolf-Sheep Predation Model](https://github.com/projectmesa/mesa-examples/tree/main/examples/wolf_sheep)
+
+Implementation of an ecological model of predation and reproduction, based on the NetLogo [Wolf Sheep Predation](http://ccl.northwestern.edu/netlogo/models/WolfSheepPredation) model.
+
+## Continuous Space Examples
+
+### [Boids Flockers Model](https://github.com/projectmesa/mesa-examples/tree/main/examples/boid_flockers)
+
+[Boids](https://en.wikipedia.org/wiki/Boids)-style flocking model, demonstrating the use of agents moving through a continuous space following direction vectors.
+
+## Network Examples
+
+### [Boltzmann Wealth Model with Network](https://github.com/projectmesa/mesa-examples/tree/main/examples/boltzmann_wealth_model_network)
+
+This is the same [Boltzmann Wealth](https://github.com/projectmesa/mesa-examples/tree/main/examples/boltzmann_wealth_model) Model, but with a network grid implementation.
+
+### [Virus on a Network Model](https://github.com/projectmesa/mesa-examples/tree/main/examples/virus_on_network)
+
+This model is based on the NetLogo [Virus on a Network](https://ccl.northwestern.edu/netlogo/models/VirusonaNetwork) model.
+
+### [Ant System for Traveling Salesman Problem](https://github.com/projectmesa/mesa-examples/tree/main/examples/aco_tsp)
+
+This is based on Dorigo's Ant System "Swarm Intelligence" algorithm for generating solutions for the Traveling Salesman Problem.
+
+## Visualization Examples
+
+### [Boltzmann Wealth Model (Experimental)](https://github.com/projectmesa/mesa-examples/tree/main/examples/boltzmann_wealth_model_experimental)
+
+Boltzmann Wealth model with the experimental Juptyer notebook visualization feature.
+
+### [Charts Example](https://github.com/projectmesa/mesa-examples/tree/main/examples/charts)
+
+A modified version of the [Bank Reserves](https://github.com/projectmesa/mesa-examples/tree/main/examples/bank_reserves) example made to provide examples of Mesa's charting tools.
+
+### [Schelling Segregation Model (Experimental)](https://github.com/projectmesa/mesa-examples/tree/main/examples/schelling_experimental)
+
+Schelling segregation model with the experimental Juptyer notebook visualization feature.
+
+### [Shape Example](https://github.com/projectmesa/mesa-examples/tree/main/examples/shape_example)
+
+Example of grid display and direction showing agents in the form of arrow-head shape.
+
+## GIS Examples
+
+### Vector Data
+
+- [GeoSchelling Model (Polygons)](https://github.com/projectmesa/mesa-examples/tree/main/gis/geo_schelling)
+- [GeoSchelling Model (Points & Polygons)](https://github.com/projectmesa/mesa-examples/tree/main/gis/geo_schelling_points)
+- [GeoSIR Epidemics Model](https://github.com/projectmesa/mesa-examples/tree/main/gis/geo_sir)
+- [Agents and Networks Model](https://github.com/projectmesa/mesa-examples/tree/main/gis/agents_and_networks)
+
+### Raster Data
+
+- [Rainfall Model](https://github.com/projectmesa/mesa-examples/tree/main/gis/rainfall)
+- [Urban Growth Model](https://github.com/projectmesa/mesa-examples/tree/main/gis/urban_growth)
+
+### Raster and Vector Data Overlay
+
+- [Population Model](https://github.com/projectmesa/mesa-examples/tree/main/gis/population)
+
+## Other Examples
+
+### [El Farol Model](https://github.com/projectmesa/mesa-examples/tree/main/examples/el_farol)
+
+This folder contains an implementation of El Farol restaurant model. Agents (restaurant customers) decide whether to go to the restaurant or not based on their memory and reward from previous trials. Implications from the model have been used to explain how individual decision-making affects overall performance and fluctuation.
+
+### [Schelling Model with Caching and Replay](https://github.com/projectmesa/mesa-examples/tree/main/examples/caching_and_replay)
+
+This example applies caching on the Mesa [Schelling](https://github.com/projectmesa/mesa-examples/tree/main/examples/schelling) example. It enables a simulation run to be "cached" or in other words recorded. The recorded simulation run is persisted on the local file system and can be replayed at any later point.