Search results

Samples are missing from the final network

Status: Open.

#350 In bacpop/PopPUNK;

· SerhEL opened on Apr 25, 2025

Issues with the use of poppunk_visualise

Status: Open.

#348 In bacpop/PopPUNK;

· vesa00 opened on Mar 4, 2025

_Pseudomonas aeruginosa_ database error

Status: Open.

#347 In bacpop/PopPUNK;

· erinyoung opened on Jan 29, 2025

Support all network.py functions in CPU and GPU modes

Status: Open.

#341 In bacpop/PopPUNK;

· johnlees opened on Jan 6, 2025

Question about de novo multi-species Nocardiopsis database

enhancementNew feature or requestNew feature or request

Status: Open.

#339 In bacpop/PopPUNK;

· ERBringHorvath opened on Dec 12, 2024

Add <code>--qc-keep</code> to <code>poppunk_assign</code>

enhancementNew feature or requestNew feature or request

Status: Open.

#335 In bacpop/PopPUNK;

· DOH-JDJ0303 opened on Oct 23, 2024

.dist.npy needed by <code>poppunk --qc-db</code>

Status: Open.

#334 In bacpop/PopPUNK;

· DOH-JDJ0303 opened on Oct 23, 2024

Taxon not beeing assigned correctly

Status: Open.

#333 In bacpop/PopPUNK;

· nermze opened on Oct 17, 2024

Improve network functions

Status: Open.

#331 In bacpop/PopPUNK;

· nickjcroucher opened on Oct 9, 2024

Remove longtosquare from visualise

Status: Open.

#329 In bacpop/PopPUNK;

· johnlees opened on Sep 27, 2024

Error when updating PopPUNK database without reference data

Status: Open.

#325 In bacpop/PopPUNK;

· HarryHung opened on Sep 11, 2024

poppunk iterate: raise TypeError("multiplier must be an int or float")

Status: Open.

#323 In bacpop/PopPUNK;

· luciagrami opened on Aug 22, 2024