What's Changed
- adding download from huggingface when the finetune_output_dir is empty by @simona-rc in #19
- Support inner-sourced model loading & publishing & loading from hub by @SagiPolaczek in #20
- Add tutorial and README badges by @SagiPolaczek in #18
- Cleaning notebook MT outputs by @SagiPolaczek in #22
- Open
pytest
for all tests by @SagiPolaczek in #26 - Allow config mismatches by @SagiPolaczek in #24
- TCR beta chain - epitope binding inference by @floccinauc in #25
- Initialize
MammalConfig
from path + minor refactoring by @SagiPolaczek in #27 - The prompt generator in TDI adds unneaded white space - this should fix that by @matanninio in #23
- inference for MoleculeNet fine-tuned models BBBP, TOXICITY, FDA_APPR by @simona-rc in #21
- Refactor molnet_infer function by @matanninio in #28
- add an option to supply a model path to load_model in the TCR task by @floccinauc in #29
- ci fix by @mosheraboh in #31
- separate model path and tokenizer path by @floccinauc in #30
- Keep metrics information on the same device by @SagiPolaczek in #32
- 'scalars' was misspelled as 'scalers', by @matanninio in #36
- Set default values when loading prediction head by @SagiPolaczek in #38
- (partially) Fix pre-trained LoRA loading by @SagiPolaczek in #35
- Cell type from gene expression by @matanninio in #33
New Contributors
- @simona-rc made their first contribution in #19
- @floccinauc made their first contribution in #25
Full Changelog: 0.2.1...v0.2.2