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Input for this model is 112,120 PNGs of chest X-rays. **Note for the notebook to automatically download the data you must install [Azcopy](https://docs.microsoft.com/en-us/azure/storage/common/storage-use-azcopy-linux#download-and-install-azcopy) and increase the size of your OS-Disk in Azure Portal so that you have at-least 45GB of free-space (the Chest X-ray data is large!). The notebooks may take more than 10 minutes to first download the data.** These notebooks train DenseNet-121 and use native data-loaders to pre-process the data and perform data-augmentation.
Comparing synthetic data to actual PNG files we can estimate the IO lag for **PyTorch (~11min), Keras(TF) (~4min), Tensorflow (~13min)!** We need to investigate this to establish the most performant data-loading pipeline and any **help is appreciated**. The current plan is to write functions in OpenCV (or perhaps use ChainerCV) and share between all frameworks.
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Input for this model is 112,120 PNGs of chest X-rays resized to (264, 264). **Note for the notebook to automatically download the data you must install [Azcopy](https://docs.microsoft.com/en-us/azure/storage/common/storage-use-azcopy-linux#download-and-install-azcopy) and increase the size of your OS-Disk in Azure Portal so that you have at-least 45GB of free-space (the Chest X-ray data is large!). The notebooks may take more than 10 minutes to first download the data.** These notebooks train DenseNet-121 and use native data-loaders to pre-process the data and perform the following data-augmentation:
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1. Random crop to from (264, 264) to (224, 224)
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2. Randon horizontal flip
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**The Chainer example is currently a bit broken and help is greatly appreciated & TF Estimator API wastes a lot of time saving/loading between training/validation**
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