Update OpenAPI generator

Author: giang-nghg

.openapi-generator/FILES

@@ -0,0 +1,21 @@
+openapi_server/__init__.py
+openapi_server/controllers/__init__.py
+openapi_server/controllers/event_controller.py
+openapi_server/controllers/file_controller.py
+openapi_server/controllers/qc_result_controller.py
+openapi_server/controllers/sample_controller.py
+openapi_server/controllers/sample_status_controller.py
+openapi_server/controllers/security_controller_.py
+openapi_server/encoder.py
+openapi_server/models/__init__.py
+openapi_server/models/base_model_.py
+openapi_server/models/error.py
+openapi_server/models/event.py
+openapi_server/models/file.py
+openapi_server/models/qc_result.py
+openapi_server/models/sample.py
+openapi_server/models/status.py
+openapi_server/openapi/openapi.yaml
+openapi_server/typing_utils.py
+openapi_server/util.py
+setup.py

.openapi-generator/VERSION

@@ -1 +1 @@
-4.3.1
+5.2.1

openapi_server/models/__init__.py

@@ -5,7 +5,7 @@
 # import models into model package
 from openapi_server.models.error import Error
 from openapi_server.models.event import Event
+from openapi_server.models.file import File
 from openapi_server.models.qc_result import QcResult
 from openapi_server.models.sample import Sample
 from openapi_server.models.status import Status
-from openapi_server.models.file import File

openapi_server/models/file.py

@@ -10,9 +10,9 @@
 
 
 class File(Model):
-    """NOTE: This class is COPIED FROM A GENERATED MODEL because OpenAPI Generator (https://openapi-generator.tech) couldn't generate the model (unknown reason).
+    """NOTE: This class is auto generated by OpenAPI Generator (https://openapi-generator.tech).
 
-    Do not edit the class manually ANY FURTHER.
+    Do not edit the class manually.
     """
 
     def __init__(self, md5sum=None, filename=None, file_type=None):  # noqa: E501
@@ -22,7 +22,7 @@ def __init__(self, md5sum=None, filename=None, file_type=None):  # noqa: E501
         :type md5sum: str
         :param filename: The filename of this File.  # noqa: E501
         :type filename: str
-        :param file_type: The file_type of this Event.  # noqa: E501
+        :param file_type: The file_type of this File.  # noqa: E501
         :type file_type: str
         """
         self.openapi_types = {
@@ -47,7 +47,7 @@ def from_dict(cls, dikt) -> 'File':
 
         :param dikt: A dict.
         :type: dict
-        :return: The File of this Event.  # noqa: E501
+        :return: The File of this File.  # noqa: E501
         :rtype: File
         """
         return util.deserialize_model(dikt, cls)
@@ -70,6 +70,8 @@ def md5sum(self, md5sum):
         :param md5sum: The md5sum of this File.
         :type md5sum: str
         """
+        if md5sum is None:
+            raise ValueError("Invalid value for `md5sum`, must not be `None`")  # noqa: E501
 
         self._md5sum = md5sum
 
@@ -91,6 +93,9 @@ def filename(self, filename):
         :param filename: The filename of this File.
         :type filename: str
         """
+        if filename is None:
+            raise ValueError("Invalid value for `filename`, must not be `None`")  # noqa: E501
+
         self._filename = filename
 
     @property

openapi_server/test/conftest.py

@@ -1,6 +1,6 @@
 import logging
 
-from hypothesis import settings
+from hypothesis import settings, HealthCheck
 from pytest import fixture
 
 from openapi_server.migrate import migrate
@@ -219,5 +219,5 @@ def _(model):
     return _
 
 
-settings.register_profile('e2e', deadline=None)
+settings.register_profile('e2e', deadline=None, suppress_health_check=(HealthCheck.function_scoped_fixture,))
 settings.load_profile('e2e')

openapi_server/test/test_invalid_sample_id.py

@@ -56,7 +56,7 @@ def _(sample_id, *args, **kwargs):
     return _
 
 
-@settings(suppress_health_check=(HealthCheck.filter_too_much,))
+@settings(suppress_health_check=(HealthCheck.filter_too_much, HealthCheck.function_scoped_fixture))
 @given(sample_id=safe_strings(min_size=1))
 def test_invalid_sample_id(sample_id, call_endpoint):
     def is_uuid(s):

openapi_server/util.py

@@ -67,6 +67,9 @@ def deserialize_date(string):
     :return: date.
     :rtype: date
     """
+    if string is None:
+      return None
+    
     try:
         from dateutil.parser import parse
         return parse(string).date()
@@ -84,6 +87,9 @@ def deserialize_datetime(string):
     :return: datetime.
     :rtype: datetime
     """
+    if string is None:
+      return None
+    
     try:
         from dateutil.parser import parse
         return parse(string)