exception handling for TOLOAD ontologies

Author: jamesamcl

ols-apps/ols-indexer/src/main/java/uk/ac/ebi/spot/ols/LoadingApplication.java

@@ -173,22 +173,22 @@ else if (deleteOntologies.length > 0){
         else {
             // otherwise load everything set TOLOAD
             for (OntologyDocument document : ontologyRepositoryService.getAllDocumentsByStatus(Status.TOLOAD)) {
-                // try {
+                try {
                     boolean loadResult = ontologyIndexingService.indexOntologyDocument(document);
                     if (loadResult)
                         updatedOntologies.add(document.getOntologyId());
                     else {
                         haserror = true;
                         failingOntologies.put(document.getOntologyId(), "An error occurred. Check logs.");
                     }
-                // } catch (Throwable t) {
-                // 	logger.error("Application failed creating indexes for " + document.getOntologyId() + ": " +
-                //             t.getMessage(), t);
-                //     exceptions.append(t.getMessage());
-                //     exceptions.append("\n");
-                //     haserror = true;
-                //     failingOntologies.put(document.getOntologyId(),t.getMessage());
-                // }
+                 } catch (Throwable t) {
+                 	logger.error("Application failed creating indexes for " + document.getOntologyId() + ": " +
+                             t.getMessage(), t);
+                     exceptions.append(t.getMessage());
+                     exceptions.append("\n");
+                     haserror = true;
+                     failingOntologies.put(document.getOntologyId(),t.getMessage());
+                 }
             }
         }