|
1 |
| -# BioDataScience 2021.0.9000 |
| 1 | +# BioDataScience 2021.0.0 |
2 | 2 |
|
3 |
| -- Dependency moved from {learndown} to {learnitdown}. Preparation of series 2021-2022. |
| 3 | +- Dependency moved from {learndown} to {learnitdown}. Preparation of series 2021-2022. |
4 | 4 |
|
5 |
| -- Management of security reworked. Now, an external course password is required. |
| 5 | +- Management of security reworked. Now, an external course password is required. |
6 | 6 |
|
7 |
| -- The `obfuscator()` function provides configuration parameters to obfuscate sensible code in {learnr} tutorials (only visible with a teacher password). |
| 7 | +- The `obfuscator()` function provides configuration parameters to obfuscate sensible code in {learnr} tutorials (only visible with a teacher password). |
8 | 8 |
|
9 | 9 | # BioDataScience 2020.0.0
|
10 | 10 |
|
11 |
| -- Clean up finished. Most code moved to {learndown}. Learnr tutorials and Shiny applications moved to {BioDataScience1}. |
| 11 | +- Clean up finished. Most code moved to {learndown}. Learnr tutorials and Shiny applications moved to {BioDataScience1}. |
12 | 12 |
|
13 |
| -- The datasets `biometry` and `biometrie` are left here. |
| 13 | +- The datasets `biometry` and `biometrie` are left here. |
14 | 14 |
|
15 |
| -- The package now contains `config()`, `sign_in()` and `sign_out()` only for database access and user identification. |
| 15 | +- The package now contains `config()`, `sign_in()` and `sign_out()` only for database access and user identification. |
16 | 16 |
|
17 |
| -- A sign out addin is added. |
| 17 | +- A sign out addin is added. |
18 | 18 |
|
19 | 19 | # BioDataScience 2020.0.9002
|
20 | 20 |
|
21 |
| -- Add `MONGO_URL_SERVER` environment variable in `init()`. |
| 21 | +- Add `MONGO_URL_SERVER` environment variable in `init()`. |
22 | 22 |
|
23 | 23 | # BioDataScience 2020.0.9001
|
24 | 24 |
|
25 |
| -- Separate `MONGO_USER` and `MONGO_PASSWORD` variables in `init()` and do not set them if already there. |
| 25 | +- Separate `MONGO_USER` and `MONGO_PASSWORD` variables in `init()` and do not set them if already there. |
26 | 26 |
|
27 | 27 | # BioDataScience 2020.0.9000
|
28 | 28 |
|
29 |
| -- In `record_sdd()`, date is now recorded in GMT timezone and with microseconds. |
| 29 | +- In `record_sdd()`, date is now recorded in GMT timezone and with microseconds. |
30 | 30 |
|
31 |
| -- An `init()` function is added to set globally `MONGO_URL` and `MONGO_BASE` environment variables for {Shiny} and {learnr} applications. |
| 31 | +- An `init()` function is added to set globally `MONGO_URL` and `MONGO_BASE` environment variables for {Shiny} and {learnr} applications. |
32 | 32 |
|
33 | 33 | # BioDataScience 2019.6.0
|
34 | 34 |
|
35 |
| -- Correction for tutorial `06b_recombinaison`. |
| 35 | +- Correction for tutorial `06b_recombinaison`. |
36 | 36 |
|
37 | 37 | # BioDataScience 2019.5.0
|
38 | 38 |
|
39 |
| -- Correction for tutorial `06b_recombinaison`. |
| 39 | +- Correction for tutorial `06b_recombinaison`. |
40 | 40 |
|
41 | 41 | # BioDataScience 2019.4.0
|
42 | 42 |
|
43 |
| -- Tutorial `06b_recombinaison` finalized. |
| 43 | +- Tutorial `06b_recombinaison` finalized. |
44 | 44 |
|
45 | 45 | # BioDataScience 2019.3.0
|
46 | 46 |
|
47 |
| -- Tutorial `01a_base` finalized. |
| 47 | +- Tutorial `01a_base` finalized. |
48 | 48 |
|
49 | 49 | # BioDataScience 2019.2.0
|
50 | 50 |
|
51 |
| -- Tutorial `01a_base` finalized. |
| 51 | +- Tutorial `01a_base` finalized. |
52 | 52 |
|
53 | 53 | # BioDataScience 2019.1.0
|
54 | 54 |
|
55 |
| -- Recheck of the all tutorials (`00a` - `13c`) with the **svbox2019** software environment: minor corrections and version updated to `2019.x.y`. |
| 55 | +- Recheck of the all tutorials (`00a` - `13c`) with the **svbox2019** software environment: minor corrections and version updated to `2019.x.y`. |
56 | 56 |
|
57 | 57 | # BioDataScience 2018.1.0
|
58 | 58 |
|
59 |
| -- Recheck of the all tutorials (`00a` - `13c`) with the **svbox2018** software environment and with the new function `collect_sdd()`: minor corrections and version updated to `2018.x.y`. |
| 59 | +- Recheck of the all tutorials (`00a` - `13c`) with the **svbox2018** software environment and with the new function `collect_sdd()`: minor corrections and version updated to `2018.x.y`. |
60 | 60 |
|
61 | 61 | # BioDataScience 2019.0.0
|
62 | 62 |
|
63 |
| -- Review of the all tutorials (`00a` - `13c`) with the **svbox2019** software environment. |
| 63 | +- Review of the all tutorials (`00a` - `13c`) with the **svbox2019** software environment. |
64 | 64 |
|
65 |
| -- Internal function `collect_sdd()` now has `user =` and `password =` arguments and the user/password used by default by `record_sdd()` cannot read data in the database anymore. |
| 65 | +- Internal function `collect_sdd()` now has `user =` and `password =` arguments and the user/password used by default by `record_sdd()` cannot read data in the database anymore. |
66 | 66 |
|
67 | 67 | # BioDataScience 2018.0.0
|
68 | 68 |
|
69 |
| -- `run()` modified to install latest release matching **svbox** year. |
| 69 | +- `run()` modified to install latest release matching **svbox** year. |
70 | 70 |
|
71 | 71 | # BioDataScience 0.25.0
|
72 | 72 |
|
73 |
| -- Review of the all tutorials (`00a` - `13c`) with the **svbox2018** software environment. |
| 73 | +- Review of the all tutorials (`00a` - `13c`) with the **svbox2018** software environment. |
74 | 74 |
|
75 | 75 | # BioDataScience 0.24.0
|
76 | 76 |
|
77 |
| -- Tutorial `examen_c` finalized. |
| 77 | +- Tutorial `examen_c` finalized. |
78 | 78 |
|
79 | 79 | # BioDataScience 0.23.1
|
80 | 80 |
|
81 |
| -- Review tutorials `00` and `02` with **svbox2019** software environment. |
| 81 | +- Review tutorials `00` and `02` with **svbox2019** software environment. |
82 | 82 |
|
83 | 83 | # BioDataScience 0.23.0
|
84 | 84 |
|
85 |
| -- Review of the all tutorials (`02a` - `12a`): corrections. |
| 85 | +- Review of the all tutorials (`02a` - `12a`): corrections. |
86 | 86 |
|
87 | 87 | # BioDataScience 0.22.0
|
88 | 88 |
|
89 |
| -- Tutorial `examen_b` finalized. |
| 89 | +- Tutorial `examen_b` finalized. |
90 | 90 |
|
91 | 91 | # BioDataScience 0.21.0
|
92 | 92 |
|
93 |
| -- Tutorial `examen_a` finalized. |
| 93 | +- Tutorial `examen_a` finalized. |
94 | 94 |
|
95 | 95 | # BioDataScience 0.20.0
|
96 | 96 |
|
97 |
| -- Tutorial `12a_correlation` finalized. |
| 97 | +- Tutorial `12a_correlation` finalized. |
98 | 98 |
|
99 | 99 | # BioDataScience 0.19.0
|
100 | 100 |
|
101 |
| -- Correction of bugs in `11b` and `11a` tutorials. |
| 101 | +- Correction of bugs in `11b` and `11a` tutorials. |
102 | 102 |
|
103 | 103 | # BioDataScience 0.18.2
|
104 | 104 |
|
105 |
| -- Tutorial `11b_syntaxr` finalized. |
| 105 | +- Tutorial `11b_syntaxr` finalized. |
106 | 106 |
|
107 |
| -- Tutorial `11a_anova2` finalized. |
| 107 | +- Tutorial `11a_anova2` finalized. |
108 | 108 |
|
109 | 109 | # BioDataScience 0.18.0
|
110 | 110 |
|
111 |
| -- Tutorial `11b_syntaxr` finalized. |
| 111 | +- Tutorial `11b_syntaxr` finalized. |
112 | 112 |
|
113 | 113 | # BioDataScience 0.17.0
|
114 | 114 |
|
115 |
| -- Tutorial `11a_anova2` finalized. |
| 115 | +- Tutorial `11a_anova2` finalized. |
116 | 116 |
|
117 | 117 | # BioDataScience 0.16.0
|
118 | 118 |
|
119 |
| -- Tutorial `10b_anova` finalized. |
| 119 | +- Tutorial `10b_anova` finalized. |
120 | 120 |
|
121 | 121 | # BioDataScience 0.15.0
|
122 | 122 |
|
123 |
| -- Tutorial `10a_anova` finalized. |
| 123 | +- Tutorial `10a_anova` finalized. |
124 | 124 |
|
125 |
| -- Addition of a test {Shiny} application (histogram.R). |
| 125 | +- Addition of a test {Shiny} application (histogram.R). |
126 | 126 |
|
127 | 127 | # BioDataScience 0.14.0
|
128 | 128 |
|
129 |
| -- Tutorial `09b_student` finalized. |
| 129 | +- Tutorial `09b_student` finalized. |
130 | 130 |
|
131 | 131 | # BioDataScience 0.13.0
|
132 | 132 |
|
133 |
| -- Tutorial `09a_student` finalized. |
| 133 | +- Tutorial `09a_student` finalized. |
134 | 134 |
|
135 | 135 | # BioDataScience 0.12.1
|
136 | 136 |
|
137 |
| -- Tutorial `08b_chi2` finalized. |
| 137 | +- Tutorial `08b_chi2` finalized. |
138 | 138 |
|
139 |
| -- Add html file `08b_chi2`. |
| 139 | +- Add html file `08b_chi2`. |
140 | 140 |
|
141 | 141 | # BioDataScience 0.12.0
|
142 | 142 |
|
143 |
| -- Tutorial `08b_chi2` finalized. |
| 143 | +- Tutorial `08b_chi2` finalized. |
144 | 144 |
|
145 | 145 | # BioDataScience 0.11.0
|
146 | 146 |
|
147 |
| -- Tutorial `08a_chi2` finalized. |
| 147 | +- Tutorial `08a_chi2` finalized. |
148 | 148 |
|
149 | 149 | # BioDataScience 0.10.0
|
150 | 150 |
|
151 |
| -- Tutorial `07b_distri` finalized. |
| 151 | +- Tutorial `07b_distri` finalized. |
152 | 152 |
|
153 | 153 | # BioDataScience 0.9.0
|
154 | 154 |
|
155 |
| -- Tutorial `07a_proba` finalized. |
| 155 | +- Tutorial `07a_proba` finalized. |
156 | 156 |
|
157 |
| -- Tutorial `06a_test` finalized. |
| 157 | +- Tutorial `06a_test` finalized. |
158 | 158 |
|
159 | 159 | # BioDataScience 0.8.0
|
160 | 160 |
|
161 |
| -- Tutorial `05a_test` finalized. |
| 161 | +- Tutorial `05a_test` finalized. |
162 | 162 |
|
163 | 163 | # BioDataScience 0.7.0
|
164 | 164 |
|
165 |
| -- Tutorial `04a_test` finalized. |
| 165 | +- Tutorial `04a_test` finalized. |
166 | 166 |
|
167 | 167 | # BioDataScience 0.6.1
|
168 | 168 |
|
169 |
| -- `record_sdd()` refactored. |
| 169 | +- `record_sdd()` refactored. |
170 | 170 |
|
171 | 171 | # BioDataScience 0.6.0
|
172 | 172 |
|
173 |
| -- Tutorial `03a_test` finalized. |
| 173 | +- Tutorial `03a_test` finalized. |
174 | 174 |
|
175 | 175 | # BioDataScience 0.5.0
|
176 | 176 |
|
177 |
| -- Add new dataset `biometry`. |
| 177 | +- Add new dataset `biometry`. |
178 | 178 |
|
179 | 179 | # BioDataScience 0.4.0
|
180 | 180 |
|
181 |
| -- Tutorial `02c_nuage_de_points` finalized. |
| 181 | +- Tutorial `02c_nuage_de_points` finalized. |
182 | 182 |
|
183 | 183 | # BioDataScience 0.3.0
|
184 | 184 |
|
185 |
| -- Tutorial `02b_decouverte` finalized. |
| 185 | +- Tutorial `02b_decouverte` finalized. |
186 | 186 |
|
187 | 187 | # BioDataScience 0.2.0
|
188 | 188 |
|
189 |
| -- Tutorial `02a_base` finalized. |
| 189 | +- Tutorial `02a_base` finalized. |
190 | 190 |
|
191 | 191 | # BioDataScience 0.1.2
|
192 | 192 |
|
193 |
| -- The `run()` function allows for selecting tutorials in a list. |
| 193 | +- The `run()` function allows for selecting tutorials in a list. |
194 | 194 |
|
195 | 195 | # BioDataScience 0.1.1
|
196 | 196 |
|
197 |
| -- The `run()` function now looks if there is an updated release and proposes to install it. Also, it provides a menu to select tutorials, in case no arguments are provided. |
| 197 | +- The `run()` function now looks if there is an updated release and proposes to install it. Also, it provides a menu to select tutorials, in case no arguments are provided. |
198 | 198 |
|
199 | 199 | # BioDataScience 0.1.0
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200 | 200 |
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